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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001193543.1 → NP_001180472.1 erbin
Status: VALIDATED
- Source sequence(s)
-
BX640501, CR854840, CR925725
- UniProtKB/TrEMBL
- A0A0R4IEU0, A0A8M1NUM6
- Related
- ENSDARP00000133788.1, ENSDART00000163446.2
- Conserved Domains (5) summary
-
- cd00116
Location:8 → 267
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1269 → 1325
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam07223
Location:951 → 1142
- DUF1421; Protein of unknown function (DUF1421)
- pfam13855
Location:230 → 288
- LRR_8; Leucine rich repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007121.7 Reference GRCz11 Primary Assembly
- Range
-
15454856..15599149
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005155576.5 → XP_005155633.1 erbin isoform X1
- UniProtKB/TrEMBL
-
A0A8M2B233
- Conserved Domains (5) summary
-
- cd00116
Location:8 → 267
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1331 → 1387
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam07223
Location:961 → 1152
- DUF1421; Protein of unknown function (DUF1421)
- pfam13855
Location:230 → 288
- LRR_8; Leucine rich repeat
-
XM_005155578.5 → XP_005155635.1 erbin isoform X3
- UniProtKB/TrEMBL
-
A0A8M2B2B1
- Conserved Domains (5) summary
-
- COG4886
Location:33 → 418
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- cd00116
Location:8 → 267
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1298 → 1354
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam07223
Location:961 → 1152
- DUF1421; Protein of unknown function (DUF1421)
-
XM_005155577.4 → XP_005155634.1 erbin isoform X2
- UniProtKB/TrEMBL
- A0A8M2B2G8, E7EYJ7
- Related
- ENSDARP00000104608.2, ENSDART00000129441.4
- Conserved Domains (5) summary
-
- cd00116
Location:8 → 267
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1321 → 1377
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam07223
Location:951 → 1142
- DUF1421; Protein of unknown function (DUF1421)
- pfam13855
Location:230 → 288
- LRR_8; Leucine rich repeat
-
XM_068223813.1 → XP_068079914.1 erbin isoform X4
- Related
- ENSDARP00000106706.2, ENSDART00000123935.4
-
XM_068223814.1 → XP_068079915.1 erbin isoform X5
- Related
- ENSDARP00000153721.1, ENSDART00000193752.1
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001080031.1: Suppressed sequence
- Description
- NM_001080031.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ERBB2IP (GeneID:55914).