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    si:ch211-262h13.3 si:ch211-262h13.3 [ Danio rerio (zebrafish) ]

    Gene ID: 569577, updated on 12-Sep-2024

    Summary

    Official Symbol
    si:ch211-262h13.3provided by ZNC
    Official Full Name
    si:ch211-262h13.3provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050208-532
    See related
    Ensembl:ENSDARG00000070898 AllianceGenome:ZFIN:ZDB-GENE-050208-532
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:171271; zgc:173415
    Orthologs
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    Genomic context

    See si:ch211-262h13.3 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (38796339..38801510, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (38809594..38814765, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137488978 Neighboring gene alkaline phosphatase, intestinal, tandem duplicate 2 Neighboring gene uncharacterized LOC137488979 Neighboring gene uncharacterized LOC137488980 Neighboring gene uncharacterized LOC131080122

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    is_active_in cellular_component  

    General protein information

    Preferred Names
    uncharacterized protein LOC569577

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082865.1 → NP_001076334.1  uncharacterized protein LOC569577

      See identical proteins and their annotated locations for NP_001076334.1

      Status: PREDICTED

      Source sequence(s)
      BX927181
      UniProtKB/TrEMBL
      A0A2R8RMR4, Q1LUV1
      Related
      ENSDARP00000115647.1, ENSDART00000140764.3
      Conserved Domains (1) summary
      pfam16064
      Location:212 → 279
      DUF4806; Domain of unknown function (DUF4806)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      38796339..38801510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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