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    ankmy1 ankyrin repeat and MYND domain containing 1 [ Danio rerio (zebrafish) ]

    Gene ID: 568987, updated on 9-Dec-2024

    Summary

    Official Symbol
    ankmy1provided by ZNC
    Official Full Name
    ankyrin repeat and MYND domain containing 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050208-740
    See related
    AllianceGenome:ZFIN:ZDB-GENE-050208-740
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    ANKMY; wu:fj17c07; si:rp71-69p9.2
    Summary
    Predicted to enable metal ion binding activity. Orthologous to human ANKMY1 (ankyrin repeat and MYND domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See ankmy1 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (15550024..15569748, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (15525637..15543620, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene glypican 5b Neighboring gene glypican 1a Neighboring gene hematopoietic SH2 domain containing Neighboring gene tropomyosin 4a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding  

    General protein information

    Preferred Names
    ankyrin repeat and MYND domain-containing protein 1
    Names
    ankyrin repeat and MYND domain protein 1
    testis specific ankyrin-like protein 1
    zinc-finger MYND domain protein 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      15550024..15569748 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_692348.9XP_697440.1  ankyrin repeat and MYND domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8M9PQ11
      Conserved Domains (4) summary
      cd00204
      Location:576731
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:608641
      ANK; ANK repeat [structural motif]
      pfam01753
      Location:900940
      zf-MYND; MYND finger
      cl27415
      Location:10118
      COG4642; Uncharacterized conserved protein [Function unknown]

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395098.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      231970..251249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021473443.2XP_021329118.1  ankyrin repeat and MYND domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8M9PQ11
      Conserved Domains (4) summary
      cd00204
      Location:576731
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:608641
      ANK; ANK repeat [structural motif]
      pfam01753
      Location:900940
      zf-MYND; MYND finger
      cl27415
      Location:10118
      COG4642; Uncharacterized conserved protein [Function unknown]
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