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    soul4 heme-binding protein soul4 [ Danio rerio (zebrafish) ]

    Gene ID: 558832, updated on 9-Dec-2024

    Summary

    Official Symbol
    soul4provided by ZNC
    Official Full Name
    heme-binding protein soul4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-110718-1
    See related
    Ensembl:ENSDARG00000101008 AllianceGenome:ZFIN:ZDB-GENE-110718-1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable heme binding activity. Is expressed in blastomere; nervous system; otic vesicle; and pronephric duct. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See soul4 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (38468036..38480154, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (38481750..38493868, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene MAP/microtubule affinity-regulating kinase 1 Neighboring gene protein tyrosine kinase 7a Neighboring gene si:ch211-126j24.1 Neighboring gene kinesin light chain 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001245995.1NP_001232924.1  heme-binding protein soul4

      See identical proteins and their annotated locations for NP_001232924.1

      Status: PROVISIONAL

      Source sequence(s)
      HQ450693
      UniProtKB/TrEMBL
      A0A8M1NYU5, F2XG13
      Related
      ENSDARP00000141664.1, ENSDART00000171704.2
      Conserved Domains (1) summary
      pfam04832
      Location:90246
      SOUL; SOUL heme-binding protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      38468036..38480154 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)