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    dnajc9 DnaJ (Hsp40) homolog, subfamily C, member 9 [ Danio rerio (zebrafish) ]

    Gene ID: 436706, updated on 9-Dec-2024

    Summary

    Official Symbol
    dnajc9provided by ZNC
    Official Full Name
    DnaJ (Hsp40) homolog, subfamily C, member 9provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-130
    See related
    Ensembl:ENSDARG00000031293 AllianceGenome:ZFIN:ZDB-GENE-040718-130
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92648
    Summary
    Predicted to enable heat shock protein binding activity. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; corneal epithelial cell; head; and immature eye. Orthologous to human DNAJC9 (DnaJ heat shock protein family (Hsp40) member C9). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See dnajc9 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (9499742..9510395)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (9461899..9472552)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene post-GPI attachment to proteins phospholipase 3 Neighboring gene si:ch211-207i20.2 Neighboring gene si:ch211-207i20.3 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 13

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables heat shock protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    dnaJ homolog subfamily C member 9

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002433.1NP_001002433.1  dnaJ homolog subfamily C member 9

      See identical proteins and their annotated locations for NP_001002433.1

      Status: PROVISIONAL

      Source sequence(s)
      BC076133
      UniProtKB/TrEMBL
      A0A8M1N0D5, Q6DH49
      Related
      ENSDARP00000044149.6, ENSDART00000044150.8
      Conserved Domains (1) summary
      pfam00226
      Location:1577
      DnaJ; DnaJ domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      9499742..9510395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394831.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      233882..243917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)