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    fam167aa family with sequence similarity 167 member Aa [ Danio rerio (zebrafish) ]

    Gene ID: 768193, updated on 9-Dec-2024

    Summary

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    Official Symbol
    fam167aaprovided by ZNC
    Official Full Name
    family with sequence similarity 167 member Aaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-061013-209
    See related
    Ensembl:ENSDARG00000067665 AllianceGenome:ZFIN:ZDB-GENE-061013-209
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:153092
    Summary
    Orthologous to human FAM167A (family with sequence similarity 167 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See fam167aa in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (5611166..5621090)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (5454070..5462702)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene chloride intracellular channel 5a Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 4 Neighboring gene ras-related protein Rab-39A Neighboring gene uncharacterized LOC137488064

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC768193

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077335.1 → NP_001070803.1  uncharacterized protein LOC768193

      See identical proteins and their annotated locations for NP_001070803.1

      Status: PREDICTED

      Source sequence(s)
      BC124636
      UniProtKB/TrEMBL
      Q08BN8
      Related
      ENSDARP00000088226.3, ENSDART00000097455.6
      Conserved Domains (1) summary
      pfam11652
      Location:99 → 182
      DUF3259; Protein of unknown function (DUF3259)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      5611166..5621090
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005169805.5 → XP_005169862.1  uncharacterized protein LOC768193 isoform X1

      UniProtKB/TrEMBL
      A0A8M2BH59, F1QRU5
      Related
      ENSDARP00000144122.1, ENSDART00000178720.2
      Conserved Domains (1) summary
      pfam11652
      Location:99 → 182
      DUF3259; Protein of unknown function (DUF3259)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394973.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      92609..101248
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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