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    cuedc2 CUE domain containing 2 [ Danio rerio (zebrafish) ]

    Gene ID: 334351, updated on 9-Dec-2024

    Summary

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    Official Symbol
    cuedc2provided by ZNC
    Official Full Name
    CUE domain containing 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6283
    See related
    Ensembl:ENSDARG00000039365 AllianceGenome:ZFIN:ZDB-GENE-030131-6283
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92255; wu:fi42e02
    Summary
    Predicted to be located in cytoplasm and nucleus. Orthologous to human CUEDC2 (CUE domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See cuedc2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (29925448..29936259)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (29794947..29805809)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101883680 Neighboring gene paired box 2a Neighboring gene uncharacterized LOC137487411 Neighboring gene hypoxia inducible factor 1 subunit alpha inhibitor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Hematopoietic gene expression profile in zebrafish kidney marrow. Song HD, et al. Proc Natl Acad Sci U S A, 2004 Nov 16. PMID 15520368, Free PMC Article
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC92255

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    CUE domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017994.2 → NP_001017994.1  CUE domain-containing protein 2

      See identical proteins and their annotated locations for NP_001017994.1

      Status: PROVISIONAL

      Source sequence(s)
      BC081633
      UniProtKB/Swiss-Prot
      Q6TLH3
      Related
      ENSDARP00000057527.3, ENSDART00000057528.5
      Conserved Domains (1) summary
      cd14367
      Location:141 → 182
      CUE_CUED2; CUE domain found in CUE domain-containing protein 2 (CUED2) and similar proteins

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      29925448..29936259
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005156782.3 → XP_005156839.1  CUE domain-containing protein 2 isoform X1

      See identical proteins and their annotated locations for XP_005156839.1

      UniProtKB/Swiss-Prot
      Q6TLH3
      Related
      ENSDARP00000107612.2, ENSDART00000123482.4
      Conserved Domains (1) summary
      cd14367
      Location:141 → 182
      CUE_CUED2; CUE domain found in CUE domain-containing protein 2 (CUED2) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6TLH3.1 GenPept UniProtKB/Swiss-Prot:Q6TLH3

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