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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_205563.1 → NP_991126.1 E3 ubiquitin-protein ligase TRIM9
See identical proteins and their annotated locations for NP_991126.1
Status: PROVISIONAL
- Source sequence(s)
-
BC065940
- UniProtKB/TrEMBL
- A0A8M2B3T8, Q6NZX0
- Related
- ENSDARP00000048738.5, ENSDART00000048739.6
- Conserved Domains (5) summary
-
- smart00502
Location:279 → 405
- BBC; B-Box C-terminal domain
- smart00336
Location:235 → 272
- BBOX; B-Box-type zinc finger
- cd00063
Location:443 → 534
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd12889
Location:531 → 684
- SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
- cl17238
Location:10 → 46
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007124.7 Reference GRCz11 Primary Assembly
- Range
-
36868365..36911132 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005156984.5 → XP_005157041.1 E3 ubiquitin-protein ligase TRIM9 isoform X2
- UniProtKB/TrEMBL
- A0A8M2B3T8, A0A8M2B3Y3
- Conserved Domains (5) summary
-
- smart00502
Location:279 → 405
- BBC; B-Box C-terminal domain
- smart00336
Location:235 → 272
- BBOX; B-Box-type zinc finger
- cd00063
Location:443 → 534
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd12889
Location:531 → 702
- SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
- cl17238
Location:10 → 46
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
-
XM_005156983.5 → XP_005157040.1 E3 ubiquitin-protein ligase TRIM9 isoform X1
- UniProtKB/TrEMBL
- A0A8M2B3C6, A0A8M2B3T8
- Conserved Domains (5) summary
-
- smart00502
Location:279 → 405
- BBC; B-Box C-terminal domain
- smart00336
Location:235 → 272
- BBOX; B-Box-type zinc finger
- cd00063
Location:443 → 534
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd12889
Location:545 → 715
- SPRY_PRY_TRIM67_9; PRY/SPRY domain in tripartite motif-containing proteins, TRIM9 and TRIM67
- cl17238
Location:10 → 46
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...