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    olfml3b olfactomedin-like 3b [ Danio rerio (zebrafish) ]

    Gene ID: 562022, updated on 9-Dec-2024

    Summary

    Official Symbol
    olfml3bprovided by ZNC
    Official Full Name
    olfactomedin-like 3bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050302-161
    See related
    Ensembl:ENSDARG00000062171 AllianceGenome:ZFIN:ZDB-GENE-050302-161
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    olfml3; olfml3a; wu:fb02c05; wu:fl19d05; zgc:153815; wu:faa48g10
    Summary
    Predicted to be involved in signal transduction. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human OLFML3 (olfactomedin like 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See olfml3b in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (24671687..24681292, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (24434071..24443676, complement)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137496697 Neighboring gene synaptotagmin VIb Neighboring gene uncharacterized LOC137496698 Neighboring gene uncharacterized LOC101886928 Neighboring gene G protein-coupled receptor 25

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    olfactomedin-like protein 3A
    Names
    olfactomedin-like 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077251.1NP_001070719.1  olfactomedin-like protein 3A precursor

      See identical proteins and their annotated locations for NP_001070719.1

      Status: PROVISIONAL

      Source sequence(s)
      BC124742
      UniProtKB/Swiss-Prot
      Q08BF8, Q29RB4
      Related
      ENSDARP00000084034.3, ENSDART00000089601.5
      Conserved Domains (2) summary
      TIGR04375
      Location:18107
      cyano_w_EgtBD; hercynine metabolism protein
      pfam02191
      Location:135378
      OLF; Olfactomedin-like domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      24671687..24681292 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394820.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      174380..183924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)