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    • Showing Current items.

    nhr-207 Nuclear receptor [ Caenorhabditis elegans ]

    Gene ID: 187661, updated on 9-Dec-2024

    Summary

    Official Symbol
    nhr-207
    Official Full Name
    Nuclear receptor
    Primary source
    WormBase:WBGene00011098
    Locus tag
    CELE_R07B7.14
    See related
    AllianceGenome:WB:WBGene00011098
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in response to starvation. Predicted to be located in nucleus. Is expressed in several structures, including anal sphincter muscle; gonad; pharyngeal neurons; pharyngeal-intestinal valve; and rectal valve cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See nhr-207 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (12096146..12097931)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nuclear receptor Neighboring gene Nuclear Hormone Receptor family Neighboring gene Nuclear hormone receptor family member nhr-209 Neighboring gene ncRNA Neighboring gene Nuclear hormone receptor family member nhr-154

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nuclear receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intracellular receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in response to starvation IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Nuclear receptor
    NP_506035.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12096146..12097931
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073634.3NP_506035.1  Nuclear receptor [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506035.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21804
      Conserved Domains (2) summary
      smart00399
      Location:36107
      ZnF_C4; c4 zinc finger in nuclear hormone receptors
      smart00430
      Location:212374
      HOLI; Ligand binding domain of hormone receptors