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    Y16B4A.2 Carboxypeptidase [ Caenorhabditis elegans ]

    Gene ID: 181572, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y16B4A.2
    Official Full Name
    Carboxypeptidase
    Primary source
    WormBase:WBGene00012445
    Locus tag
    CELE_Y16B4A.2
    See related
    AllianceGenome:WB:WBGene00012445
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Located in membrane raft. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y16B4A.2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    35
    Sequence:
    Chromosome: X; NC_003284.9 (14761924..14771851, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial Neighboring gene Metalloprotease TIKI homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An analysis of the Caenorhabditis elegans lipid raft proteome using geLC-MS/MS. Rao W, et al. J Proteomics, 2011 Feb 1. PMID 21070894
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables serine-type carboxypeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane raft HDA PubMed 

    General protein information

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    Preferred Names
    Carboxypeptidase
    NP_510452.4
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      14761924..14771851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078051.8 → NP_510452.4  Carboxypeptidase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510452.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      K8ESM2
      Conserved Domains (2) summary
      pfam00450
      Location:520 → 991
      Peptidase_S10; Serine carboxypeptidase
      cl08270
      Location:38 → 480
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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