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    B0563.7 putative calcium-binding protein B0563.7 [ Caenorhabditis elegans ]

    Gene ID: 182041, updated on 9-Dec-2024

    Summary

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    Official Symbol
    B0563.7
    Official Full Name
    putative calcium-binding protein B0563.7
    Primary source
    WormBase:WBGene00015264
    Locus tag
    CELE_B0563.7
    See related
    AllianceGenome:WB:WBGene00015264
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable calcium ion binding activity and microtubule binding activity. Predicted to be involved in microtubule cytoskeleton organization. Predicted to be active in microtubule organizing center. Orthologous to human CETN1 (centrin 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See B0563.7 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    5
    Sequence:
    Chromosome: X; NC_003284.9 (9152414..9154316, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein;putative G-protein coupled receptor B0563.6 Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Transmembrane BAX inhibitor motif-containing protein 4 Neighboring gene Tetraspanin Neighboring gene Neuropeptide-Like Protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cytokinesis is not controlled by calmodulin or myosin light chain kinase in the Caenorhabditis elegans early embryo. Batchelder EL, et al. FEBS Lett, 2007 Sep 4. PMID 17716666, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results rule out the calmodulin/MLCK pathway as the missing regulator of cytokinesis in the C. elegans early embryo.
      Title: Cytokinesis is not controlled by calmodulin or myosin light chain kinase in the Caenorhabditis elegans early embryo.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative calcium-binding protein B0563.7
    NP_509544.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      9152414..9154316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077143.2 → NP_509544.1  putative calcium-binding protein B0563.7 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509544.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q11083
      Conserved Domains (2) summary
      PTZ00184
      Location:46 → 183
      PTZ00184; calmodulin; Provisional
      cd00051
      Location:52 → 114
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q11083.1

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