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    col-180 Nematode cuticle collagen N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181356, updated on 4-Jan-2025

    Summary

    Official Symbol
    col-180
    Official Full Name
    Nematode cuticle collagen N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00000753
    Locus tag
    CELE_C44C10.1
    See related
    AllianceGenome:WB:WBGene00000753
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

    See col-180 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    1
    Sequence:
    Chromosome: X; NC_003284.9 (11711378..11712280, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Rhoptry protein Neighboring gene CX domain-containing protein;Microtubule-associated protein Jupiter Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    part_of collagen trimer  
    located_in membrane  

    General protein information

    Preferred Names
    Nematode cuticle collagen N-terminal domain-containing protein
    NP_509960.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      11711378..11712280 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077559.3NP_509960.1  Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509960.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18620
      Conserved Domains (2) summary
      smart01088
      Location:1668
      Col_cuticle_N; Nematode cuticle collagen N-terminal domain
      PRK07764
      Location:72270
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
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