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    Y18D10A.23 Amino acid transporter transmembrane domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173155, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y18D10A.23
    Official Full Name
    Amino acid transporter transmembrane domain-containing protein
    Primary source
    WormBase:WBGene00012487
    Locus tag
    CELE_Y18D10A.23
    See related
    AllianceGenome:WB:WBGene00012487
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in glutamine transport. Predicted to be located in membrane. Is expressed in excretory cell and ut2. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y18D10A.23 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    7
    Sequence:
    Chromosome: I; NC_003279.8 (12866988..12869576, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene C-type lectin domain-containing protein Neighboring gene C-type lectin domain-containing protein Neighboring gene Protein pad-1 Neighboring gene Cytochrome c oxidase assembly factor 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in glutamine transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Amino acid transporter transmembrane domain-containing protein
    NP_493251.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      12866988..12869576 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060850.5 → NP_493251.1  Amino acid transporter transmembrane domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493251.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XW19
      Conserved Domains (1) summary
      cl00456
      Location:37 → 391
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version

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