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    Y39B6A.7 SGNH hydrolase-type esterase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 189736, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y39B6A.7
    Official Full Name
    SGNH hydrolase-type esterase domain-containing protein
    Primary source
    WormBase:WBGene00012669
    Locus tag
    CELE_Y39B6A.7
    See related
    AllianceGenome:WB:WBGene00012669
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable hydrolase activity. Predicted to be involved in lipid metabolic process. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y39B6A.7 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (19145653..19149157, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Glycine-rich cell wall structural protein 1.8-like Neighboring gene BPTI/Kunitz inhibitor domain-containing protein Neighboring gene tRNA-Glu Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Tetraspanin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    SGNH hydrolase-type esterase domain-containing protein
    NP_741691.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      19145653..19149157 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171601.3 → NP_741691.2  SGNH hydrolase-type esterase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741691.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NET4
      Conserved Domains (1) summary
      cd01823
      Location:133 → 387
      SEST_like; A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different ...
    Nucleotide Protein
    Heading Accession and Version

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