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    R02F2.4 Chitin-binding type-2 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175755, updated on 9-Dec-2024

    Summary

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    Official Symbol
    R02F2.4
    Official Full Name
    Chitin-binding type-2 domain-containing protein
    Primary source
    WormBase:WBGene00019833
    Locus tag
    CELE_R02F2.4
    See related
    AllianceGenome:WB:WBGene00019833
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See R02F2.4 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (5484289..5486005)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene Uncharacterized protein Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene Myb-binding protein 1A-like protein Neighboring gene Rho guanine nucleotide exchange factor osg-1 Neighboring gene Amino acid transporter transmembrane domain-containing protein Neighboring gene Large ribosomal subunit protein mL62

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conservation of caspase substrates across metazoans suggests hierarchical importance of signaling pathways over specific targets and cleavage site motifs in apoptosis. Crawford ED, et al. Cell Death Differ, 2012 Dec. PMID 22918439, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Chitin-binding type-2 domain-containing protein
    NP_498171.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      5484289..5486005
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065770.4 → NP_498171.1  Chitin-binding type-2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498171.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21650
      Conserved Domains (2) summary
      smart00494
      Location:240 → 283
      ChtBD2; Chitin-binding domain type 2
      pfam01607
      Location:310 → 361
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version

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