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    clec-18 C-type LECtin [ Caenorhabditis elegans ]

    Gene ID: 186419, updated on 28-Oct-2024

    Summary

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    Official Symbol
    clec-18
    Official Full Name
    C-type LECtin
    Primary source
    WormBase:WBGene00010169
    Locus tag
    CELE_F56H6.8
    See related
    AllianceGenome:WB:WBGene00010169
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See clec-18 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003279.8 (12301424..12303157, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog Neighboring gene Glycosyltransferase Neighboring gene Glycosyltransferase Neighboring gene Acyl_transf_3 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    C-type LECtin
    NP_493109.1
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      12301424..12303157 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060708.1 → NP_493109.1  C-type LECtin [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493109.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45586
      Conserved Domains (2) summary
      smart00034
      Location:25 → 152
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
      cd00041
      Location:312 → 405
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    Nucleotide Protein
    Heading Accession and Version

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