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    sna-3 NADAR domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175878, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sna-3
    Official Full Name
    NADAR domain-containing protein
    Primary source
    WormBase:WBGene00016015
    Locus tag
    CELE_C23G10.8
    See related
    AllianceGenome:WB:WBGene00016015
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in several structures, including germ cell; intestine; nervous system; somatic cell; and tail. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sna-3 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    11
    Sequence:
    Chromosome: III; NC_003281.10 (6202622..6206211, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene putative tRNA (uracil-O(2)-)-methyltransferase Neighboring gene 26S proteasome non-ATPase regulatory subunit 1 Neighboring gene Small ribosomal subunit protein uS3 Neighboring gene RutC family protein C23G10.2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel, essential trans-splicing protein connects the nematode SL1 snRNP to the CBC-ARS2 complex. Fasimoye RY, et al. Nucleic Acids Res, 2022 Jul 22. PMID 35736244, Free PMC Article
    2. Robust co-immunoprecipitation with mass spectrometry for Caenorhabditis elegans using solid-phase enhanced sample preparation. Baytek G, et al. Biotechniques, 2022 May. PMID 35297663
    3. FACT Sets a Barrier for Cell Fate Reprogramming in Caenorhabditis elegans and Human Cells. Kolundzic E, et al. Dev Cell, 2018 Sep 10. PMID 30078731, Free PMC Article
    4. Functional identification of microRNA-centered complexes in C. elegans. Hebbar S, et al. Sci Rep, 2022 May 3. PMID 35504914, Free PMC Article
    5. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A novel, essential trans-splicing protein connects the nematode SL1 snRNP to the CBC-ARS2 complex.
      Title: A novel, essential trans-splicing protein connects the nematode SL1 snRNP to the CBC-ARS2 complex.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    NADAR domain-containing protein
    NP_498348.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6202622..6206211 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065947.7 → NP_498348.1  NADAR domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498348.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9GYR5
      Conserved Domains (2) summary
      PTZ00449
      Location:764 → 926
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      cd15457
      Location:226 → 402
      NADAR; Escherichia coli swarming motility protein YbiA and related proteins
    Nucleotide Protein
    Heading Accession and Version

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