azin-1 AntiZyme INhibitor;Antizyme inhibitor 1;BRCA1 [Caenorhabditis elegans] - Gene

Summary

Go to the top of the page Help

Official Symbol: azin-1
Official Full Name: AntiZyme INhibitor;Antizyme inhibitor 1;BRCA1
Primary source: WormBase:WBGene00018764
Locus tag: CELE_F53F10.2
See related: AllianceGenome:WB:WBGene00018764
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable catalytic activity. Predicted to be involved in polyamine biosynthetic process. [provided by Alliance of Genome Resources, Dec 2024]
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

See azin-1 in Genome Data Viewer

Location:: chromosome: I

Exon count:: 7

Sequence:: Chromosome: I; NC_003279.8 (3830562..3834124)

Chromosome I - NC_003279.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Markers

F53F10.2 (e-PCR)
- UniSTS:311748

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables catalytic activity	IEA Inferred from Electronic Annotation more info
NOT enables ornithine decarboxylase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in polyamine biosynthetic process	IEA Inferred from Electronic Annotation more info
NOT involved_in putrescine biosynthetic process from ornithine	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
NOT is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

Go to the top of the page Help

Preferred Names: AntiZyme INhibitor;Antizyme inhibitor 1;BRCA1

NP_001368678.1

Confirmed by transcript evidence;
Product from WormBase gene class azin

NP_001368679.1

Confirmed by transcript evidence

NP_001379758.1

Confirmed by transcript evidence

NP_001380232.1

Confirmed by transcript evidence;
Product from WormBase gene class azin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003279.8 Reference assembly

Range

3830562..3834124

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001393290.1 → NP_001379758.1 Antizyme inhibitor 1 [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

O01579

Conserved Domains (1) summary

cl00261
Location:55 → 416

PLPDE_III; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes
NM_001393288.1 → NP_001380232.1 AntiZyme INhibitor [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2K5ATM2
NM_001381737.3 → NP_001368678.1 AntiZyme INhibitor [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2K5ATM9
NM_001381744.1 → NP_001368679.1 BRCA1, partial [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2K5ATP6