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    F47D12.3 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 185932, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F47D12.3
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00018560
    Locus tag
    CELE_F47D12.3
    See related
    AllianceGenome:WB:WBGene00018560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein homooligomerization. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F47D12.3 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003281.10 (6298461..6299374)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Kelch repeat and BTB domain-containing protein F47D12.7 Neighboring gene WD_REPEATS_REGION domain-containing protein;putative WD repeat-containing protein F47D12.9 Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein;Muscarinic acetylcholine receptor gar-2 Neighboring gene ncRNA Neighboring gene Protein kinase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_498381.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6298461..6299374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065980.3 → NP_498381.1  Uncharacterized protein CELE_F47D12.3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498381.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09389
      Conserved Domains (1) summary
      cl02518
      Location:71 → 114
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q09389.1

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