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    slcr-46.1 SoLute Carrier family Related [ Caenorhabditis elegans ]

    Gene ID: 180736, updated on 9-Dec-2024

    Summary

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    Official Symbol
    slcr-46.1
    Official Full Name
    SoLute Carrier family Related
    Primary source
    WormBase:WBGene00016705
    Locus tag
    CELE_C46C11.2
    See related
    AllianceGenome:WB:WBGene00016705
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be active in membrane. Orthologous to human SLC46A2 (solute carrier family 46 member 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See slcr-46.1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    12
    Sequence:
    Chromosome: X; NC_003284.9 (4632361..4635780)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Integral membrane protein Neighboring gene ncRNA Neighboring gene Hormone-sensitive lipase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SoLute Carrier family Related
    NP_001033534.2
    • Confirmed by transcript evidence;
      Product from WormBase gene class slcr

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      4632361..4635780
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001038445.5 → NP_001033534.2  SoLute Carrier family Related [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001033534.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZC0
      Conserved Domains (2) summary
      pfam07555
      Location:5 → 116
      NAGidase; beta-N-acetylglucosaminidase
      cl28910
      Location:72 → 471
      MFS; Major Facilitator Superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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