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    dnj-5 DnaJ homolog dnj-5;J domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174122, updated on 9-Dec-2024

    Summary

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    Official Symbol
    dnj-5
    Official Full Name
    DnaJ homolog dnj-5;J domain-containing protein
    Primary source
    WormBase:WBGene00001023
    Locus tag
    CELE_C04A2.7
    See related
    AllianceGenome:WB:WBGene00001023
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human DNAJC14 (DnaJ heat shock protein family (Hsp40) member C14). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See dnj-5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    17
    Sequence:
    Chromosome: II; NC_003280.10 (6853461..6858301, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Growth hormone-regulated TBC protein 6 Neighboring gene Activin_recp domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Leu Neighboring gene Cell fusion protein aff-1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DnaJ homolog dnj-5;J domain-containing protein
    NP_001367422.1
    • Partially confirmed by transcript evidence
    NP_495400.2
    • Confirmed by transcript evidence
    NP_741015.1
    • Partially confirmed by transcript evidence
    NP_741016.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      6853461..6858301 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171014.7 → NP_741015.1  DnaJ homolog dnj-5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741015.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09446
      Conserved Domains (2) summary
      cd06257
      Location:659 → 708
      DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
      pfam14901
      Location:750 → 839
      Jiv90; Cleavage inducing molecular chaperone

    2. NM_062999.10 → NP_495400.2  DnaJ homolog dnj-5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495400.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09446, Q95QY2, Q95QY3, Q95QY4
      Conserved Domains (2) summary
      cd06257
      Location:660 → 709
      DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
      pfam14901
      Location:751 → 840
      Jiv90; Cleavage inducing molecular chaperone

    3. NM_171015.7 → NP_741016.1  J domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741016.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MQF1
      Conserved Domains (2) summary
      cd06257
      Location:660 → 709
      DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
      pfam14901
      Location:749 → 823
      Jiv90; Cleavage inducing molecular chaperone

    4. NM_001381467.2 → NP_001367422.1  DnaJ homolog dnj-5 [Caenorhabditis elegans]

      Status: REVIEWED

      Conserved Domains (2) summary
      cd06257
      Location:660 → 709
      DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
      pfam14901
      Location:749 → 821
      Jiv90; Cleavage inducing molecular chaperone
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q09446.2

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