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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286638.2 → NP_001273567.1  palmitoyltransferase ZDHHC20 isoform 2
See identical proteins and their annotated locations for NP_001273567.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains multiple differences in the coding region, compared to variant 1, including initiation of translation at a downstream in-frame start codon. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AK299354, AL136219, BU685378
- Consensus CDS
-
CCDS73551.1
- UniProtKB/TrEMBL
-
B4DRN8
- Related
- ENSP00000443236.1, ENST00000542645.5
- Conserved Domains (1) summary
-
- cl19890
Location:52 → 238
- zf-DHHC; DHHC palmitoyltransferase
-
NM_001330059.2 → NP_001316988.1  palmitoyltransferase ZDHHC20 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice site, contains an alternate exon in the 3' coding region and differs in its 3' UTR, compared to variant 1. The encoded isoform (3) is longer and has a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AB040396, AL136219, BC067898, BU685378, CR737535, DR003340
- Consensus CDS
-
CCDS81758.1
- UniProtKB/Swiss-Prot
- A8MTV9, C9JG20, I6L9D4, Q2TB82, Q5W0Z9, Q6NVU8
- UniProtKB/TrEMBL
-
B4DIW0
- Related
- ENSP00000383433.3, ENST00000400590.8
- Conserved Domains (1) summary
-
- cl19890
Location:16 → 301
- zf-DHHC; DHHC palmitoyltransferase
-
NM_153251.4 → NP_694983.2  palmitoyltransferase ZDHHC20 isoform 1
See identical proteins and their annotated locations for NP_694983.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AL136219, BC050367, BG720734, BU685378
- Consensus CDS
-
CCDS45017.1
- UniProtKB/TrEMBL
-
B4DIW0
- Related
- ENSP00000371905.3, ENST00000382466.7
- Conserved Domains (1) summary
-
- cl19890
Location:16 → 301
- zf-DHHC; DHHC palmitoyltransferase
RNA
-
NR_104486.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains multiple differences in the internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL136219, BC067898, BU685378
-
NR_104487.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains multiple differences in the internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL136219, BC034944, BC110517, BU685378