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    EMB2769 Cwf15 / Cwc15 cell cycle control family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820510, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EMB2769
    Official Full Name
    Cwf15 / Cwc15 cell cycle control family protein
    Primary source
    TAIR:AT3G13200
    Locus tag
    AT3G13200
    See related
    Araport:AT3G13200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMBRYO DEFECTIVE 2769
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    Genomic context

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    See EMB2769 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (4242100..4244173)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein Neighboring gene WEB family protein (DUF827) Neighboring gene miscRNA Neighboring gene crooked neck protein, putative / cell cycle protein Neighboring gene ABC-2 type transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The integral spliceosomal component CWC15 is required for development in Arabidopsis. Slane D, et al. Sci Rep, 2020 Aug 7. PMID 32770129, Free PMC Article
    2. Arabidopsis ACINUS is O-glycosylated and regulates transcription and alternative splicing of regulators of reproductive transitions. Bi Y, et al. Nat Commun, 2021 Feb 11. PMID 33574257, Free PMC Article
    3. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_112160.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Prp19 complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Cwf15 / Cwc15 cell cycle control family protein
    NP_566447.1
    • EMBRYO DEFECTIVE 2769 (EMB2769); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cwf15/Cwc15 cell cycle control protein (InterPro:IPR006973); Has 4871 Blast hits to 3670 proteins in 321 species: Archae - 3; Bacteria - 193; Metazoa - 1657; Fungi - 645; Plants - 225; Viruses - 150; Other Eukaryotes - 1998 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4242100..4244173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112160.4 → NP_566447.1  Cwf15 / Cwc15 cell cycle control family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566447.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VMG1, Q8LD33, Q93XX6, Q9LK52
      Conserved Domains (1) summary
      pfam04889
      Location:1 → 229
      Cwf_Cwc_15; Cwf15/Cwc15 cell cycle control protein
    Nucleotide Protein
    Heading Accession and Version

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