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    STP12 sugar transporter protein 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828233, updated on 18-Sep-2024

    Summary

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    Official Symbol
    STP12
    Official Full Name
    sugar transporter protein 12
    Primary source
    TAIR:AT4G21480
    Locus tag
    AT4G21480
    See related
    Araport:AT4G21480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18E5.100; F18E5_100; sugar transporter protein 12
    Summary
    Putative sugar transporter. Expressed in nematode-induced root syncytia.
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    Genomic context

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    See STP12 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (11433303..11435284, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PapD-like superfamily protein Neighboring gene Ribosomal protein S24/S35 Neighboring gene riboflavin kinase/FMN hydrolase Neighboring gene NAD(P)H dehydrogenase B3 Neighboring gene ncRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sugar Transporter STP7 Specificity for l-Arabinose and d-Xylose Contrasts with the Typical Hexose Transporters STP8 and STP12. Rottmann T, et al. Plant Physiol, 2018 Mar. PMID 29311272, Free PMC Article
    2. Diversity and activity of sugar transporters in nematode-induced root syncytia. Hofmann J, et al. J Exp Bot, 2009. PMID 19487386, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. STP12 is hexose symporter.STP12 gene expression and subcellular localization.
      Title: Sugar Transporter STP7 Specificity for l-Arabinose and d-Xylose Contrasts with the Typical Hexose Transporters STP8 and STP12.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_118268.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables monosaccharide transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within monosaccharide transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to nematode IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sugar transporter protein 12
    NP_193879.4
    • sugar transporter protein 12 (STP12); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter 1 (TAIR:AT1G11260.1); Has 29334 Blast hits to 28788 proteins in 2015 species: Archae - 490; Bacteria - 14513; Metazoa - 3914; Fungi - 6644; Plants - 2469; Viruses - 2; Other Eukaryotes - 1302 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11433303..11435284 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118268.4 → NP_193879.4  sugar transporter protein 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193879.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V2V7, A0A5S9XUH6, A0A654FRF9
      Conserved Domains (1) summary
      cd17361
      Location:29 → 474
      MFS_STP; Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters
    Nucleotide Protein
    Heading Accession and Version

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