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    Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825379, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pectinacetylesterase family protein
    Primary source
    TAIR:AT3G62060
    Locus tag
    AT3G62060
    See related
    Araport:AT3G62060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PAE6; pectin acetylesterase 6
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (22979848..22983250)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene rotamase CYP 4 Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene Putative endonuclease or glycosyl hydrolase Neighboring gene uncharacterized protein Neighboring gene SNF7 family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_116071.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Pectinacetylesterase family protein
    NP_191765.2
    • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT2G46930.1); Has 544 Blast hits to 534 proteins in 92 species: Archae - 0; Bacteria - 38; Metazoa - 118; Fungi - 0; Plants - 304; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22979848..22983250
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340136.1 → NP_001326878.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQL7, A0A5S9XMZ5

    2. NM_116071.5 → NP_191765.2  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191765.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84JS1, Q9M1R8
      UniProtKB/TrEMBL
      A0A5S9XMZ5, A0A654FK13
      Conserved Domains (1) summary
      pfam03283
      Location:54 → 398
      PAE; Pectinacetylesterase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84JS1.1

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