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    • Showing Current items.

    F10B5.2 Protein AAR2 homolog [ Caenorhabditis elegans ]

    Gene ID: 184284, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F10B5.2
    Official Full Name
    Protein AAR2 homolog
    Primary source
    WormBase:WBGene00008639
    Locus tag
    CELE_F10B5.2
    See related
    AllianceGenome:WB:WBGene00008639
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in spliceosomal tri-snRNP complex assembly. Orthologous to human AAR2 (AAR2 splicing factor). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F10B5.2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (8144762..8147236)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Transitional endoplasmic reticulum ATPase homolog 2 Neighboring gene Integrator complex subunit 11 Neighboring gene Large ribosomal subunit protein uL16 Neighboring gene BTB domain-containing protein Neighboring gene Tubby protein homolog 1 Neighboring gene Transmembrane protein 138

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in spliceosomal tri-snRNP complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Protein AAR2 homolog
    NP_495708.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8144762..8147236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063307.7 → NP_495708.1  Protein AAR2 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495708.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09305
      Conserved Domains (3) summary
      cd13777
      Location:18 → 140
      Aar2_N; N-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor
      cd13778
      Location:203 → 350
      Aar2_C; C-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor
      pfam05282
      Location:16 → 355
      AAR2; AAR2 protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q09305.1

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