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    Y38C1AB.5 N-acetylgalactosaminide beta-1,3-galactosyltransferase [ Caenorhabditis elegans ]

    Gene ID: 176819, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y38C1AB.5
    Official Full Name
    N-acetylgalactosaminide beta-1,3-galactosyltransferase
    Primary source
    WormBase:WBGene00021407
    Locus tag
    CELE_Y38C1AB.5
    See related
    AllianceGenome:WB:WBGene00021407
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable glycosyltransferase activity. Predicted to be located in membrane. Orthologous to human C1GALT1C1L (C1GALT1 specific chaperone 1 like). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y38C1AB.5 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (8765..11070, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene FERM domain (protein4.1-ezrin-radixin-moesin) family Neighboring gene Ion transport domain-containing protein Neighboring gene Protein containing ALS2cr12 (ALS2CR12) signature

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    N-acetylgalactosaminide beta-1,3-galactosyltransferase
    NP_499851.3
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      8765..11070 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067450.3 → NP_499851.3  N-acetylgalactosaminide beta-1,3-galactosyltransferase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499851.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5ECT3
      Conserved Domains (1) summary
      cl21608
      Location:33 → 129
      Galactosyl_T; Galactosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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