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    F16H6.7 ABC transporter [ Caenorhabditis elegans ]

    Gene ID: 184594, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F16H6.7
    Official Full Name
    ABC transporter
    Primary source
    WormBase:WBGene00008897
    Locus tag
    CELE_F16H6.7
    See related
    AllianceGenome:WB:WBGene00008897
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable cysteine-type peptidase activity. Predicted to be involved in proteolysis. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F16H6.7 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (18207064..18209171, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ShKT domain-containing protein Neighboring gene ncRNA Neighboring gene DRBM domain-containing protein Neighboring gene pseudo Neighboring gene Mediator of RNA polymerase II transcription subunit 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables cysteine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ABC transporter
    NP_507562.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      18207064..18209171 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075161.4 → NP_507562.3  ABC transporter [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507562.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XV94
      Conserved Domains (1) summary
      pfam06162
      Location:13 → 171
      PgaPase_1; Putative pyroglutamyl peptidase PgaPase_1
    Nucleotide Protein
    Heading Accession and Version

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