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    C25D7.5 Metallo-beta-lactamase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 182884, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C25D7.5
    Official Full Name
    Metallo-beta-lactamase domain-containing protein
    Primary source
    WormBase:WBGene00007717
    Locus tag
    CELE_C25D7.5
    See related
    AllianceGenome:WB:WBGene00007717
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in innate immune response. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C25D7.5 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (15053765..15056291)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Zinc finger protein sdc-3 Neighboring gene DUF38 domain-containing protein;F-box domain-containing protein Neighboring gene 40S ribosomal protein S20 Neighboring gene DNA replication licensing factor MCM3 Neighboring gene Uncharacterized protein Neighboring gene small monomeric GTPase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in innate immune response HEP PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Metallo-beta-lactamase domain-containing protein
    NP_506705.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      15053765..15056291
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074304.5 → NP_506705.2  Metallo-beta-lactamase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506705.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17598
      Conserved Domains (1) summary
      cl23716
      Location:182 → 351
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain
    Nucleotide Protein
    Heading Accession and Version

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