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    Gfod1 Gfo/Idh/MocA-like oxidoreductase domain containing 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 306842, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gfod1provided by RGD
    Official Full Name
    Gfo/Idh/MocA-like oxidoreductase domain containing 1provided by RGD
    Primary source
    RGD:1311507
    See related
    EnsemblRapid:ENSRNOG00000068332 AllianceGenome:RGD:1311507
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable nucleotide binding activity and oxidoreductase activity. Orthologous to human GFOD1 (Gfo/Idh/MocA-like oxidoreductase domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 155.5), Brain (RPKM 153.0) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Gfod1 in Genome Data Viewer
    Location:
    17p14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (21606090..21710922)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (21400142..21504972)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (23818370..23924393, complement)

    Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134482769 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC102547830 Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene TBC1 domain family, member 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    glucose-fructose oxidoreductase domain-containing protein 1
    Names
    glucose-fructose oxidoreductase domain containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001170334.1NP_001163805.1  glucose-fructose oxidoreductase domain-containing protein 1

      See identical proteins and their annotated locations for NP_001163805.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000017
      UniProtKB/TrEMBL
      D3ZR63
      Related
      ENSRNOP00000099186.1, ENSRNOT00000099697.2
      Conserved Domains (1) summary
      COG0673
      Location:5363
      MviM; Predicted dehydrogenase [General function prediction only]

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086035.1 Reference GRCr8

      Range
      21606090..21710922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039095674.2XP_038951602.1  glucose-fructose oxidoreductase domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cl40708
      Location:19260
      MviM; Predicted dehydrogenase [General function prediction only]
    2. XM_039095675.2XP_038951603.1  glucose-fructose oxidoreductase domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cl40708
      Location:19260
      MviM; Predicted dehydrogenase [General function prediction only]
    3. XM_063276380.1XP_063132450.1  glucose-fructose oxidoreductase domain-containing protein 1 isoform X1