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    NET4A Kinase interacting (KIP1-like) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835944, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NET4A
    Official Full Name
    Kinase interacting (KIP1-like) family protein
    Primary source
    TAIR:AT5G58320
    Locus tag
    AT5G58320
    See related
    Araport:AT5G58320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MCK7.19; MCK7_19; Networked 4A
    Summary
    Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the tonoplast membrane. It is expressed in the epidermis of the root meristem and the early expansion zone.
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    Genomic context

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    See NET4A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (23577128..23579786)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene regulatory particle triple-A ATPase 3 Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene ncRNA Neighboring gene methyl esterase 18 Neighboring gene ncRNA Neighboring gene lactate/malate dehydrogenase family protein Neighboring gene myb-like HTH transcriptional regulator family protein Neighboring gene with no lysine (K) kinase 4 Neighboring gene ovate family protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NET4 Modulates the Compactness of Vacuoles in Arabidopsis thaliana. Kaiser S, et al. Int J Mol Sci, 2019 Sep 25. PMID 31557830, Free PMC Article
    2. A superfamily of actin-binding proteins at the actin-membrane nexus of higher plants. Deeks MJ, et al. Curr Biol, 2012 Sep 11. PMID 22840520
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001037018.2
    NM_001345297.1
    NM_001345298.1
    NM_125217.4
    NM_180882.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    colocalizes_with actin filament IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in vacuolar membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Kinase interacting (KIP1-like) family protein
    NP_001032095.1
    • Kinase interacting (KIP1-like) family protein; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G30500.2); Has 42357 Blast hits to 25393 proteins in 1812 species: Archae - 756; Bacteria - 4857; Metazoa - 21184; Fungi - 4124; Plants - 2465; Viruses - 154; Other Eukaryotes - 8817 (source: NCBI BLink).
    NP_001318828.1
    • Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G30500.2); Has 43389 Blast hits to 26086 proteins in 1835 species: Archae - 761; Bacteria - 5000; Metazoa - 21918; Fungi - 3966; Plants - 2572; Viruses - 157; Other Eukaryotes - 9015 (source: NCBI BLink).
    NP_200640.2
    • Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G30500.2); Has 87194 Blast hits to 45939 proteins in 2484 species: Archae - 1365; Bacteria - 11817; Metazoa - 42844; Fungi - 7633; Plants - 4908; Viruses - 277; Other Eukaryotes - 18350 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23577128..23579786
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345297.1 → NP_001318828.1  Kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YFA4
      Conserved Domains (2) summary
      pfam07765
      Location:23 → 95
      KIP1; KIP1-like protein
      cl19219
      Location:191 → 281
      DUF342; Protein of unknown function (DUF342)

    2. NM_125217.4 → NP_200640.2  Kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200640.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4KEW8, F4KEW9, Q0WT63, Q2V2X5, Q9LVL8
      UniProtKB/TrEMBL
      A0A5S9YFA4, A0A654GCK3
      Conserved Domains (2) summary
      COG1196
      Location:196 → 526
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam07765
      Location:23 → 95
      KIP1; KIP1-like protein

    3. NM_180882.3 → NP_851213.2  Kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851213.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YFA4
      Conserved Domains (2) summary
      pfam07765
      Location:23 → 95
      KIP1; KIP1-like protein
      cl19219
      Location:191 → 281
      DUF342; Protein of unknown function (DUF342)

    4. NM_001345298.1 → NP_001332489.1  Kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4KEW8, F4KEW9, Q0WT63, Q2V2X5, Q9LVL8
      UniProtKB/TrEMBL
      A0A5S9YFA4, A0A654GCK3
      Conserved Domains (2) summary
      COG1196
      Location:196 → 526
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam07765
      Location:23 → 95
      KIP1; KIP1-like protein

    5. NM_001037018.2 → NP_001032095.1  Kinase interacting (KIP1-like) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032095.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4KEW8
      Conserved Domains (1) summary
      pfam07765
      Location:1 → 52
      KIP1; KIP1-like protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4KEW8.1

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