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    Nucleotide-sugar transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834180, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleotide-sugar transporter family protein
    Primary source
    TAIR:AT5G41760
    Locus tag
    AT5G41760
    See related
    Araport:AT5G41760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K16L22.3; K16L22_3
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (16706850..16709909)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A CMP-sialic acid transporter cloned from Arabidopsis thaliana. Bakker H, et al. Carbohydr Res, 2008 Aug 11. PMID 18258224
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001036915.4
    NM_123541.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables CMP-N-acetylneuraminate transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables pyrimidine nucleotide-sugar transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sialic acid transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sialic acid transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleotide-sugar transporter family protein
    NP_001031992.1
    • Nucleotide-sugar transporter family protein; FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, CMP-sialic acid transmembrane transporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: endomembrane system, integral to membrane, Golgi membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189), UDP-galactose transporter (InterPro:IPR004689); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G35335.1); Has 1068 Blast hits to 1053 proteins in 185 species: Archae - 0; Bacteria - 3; Metazoa - 567; Fungi - 123; Plants - 182; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink).
    NP_568596.1
    • Nucleotide-sugar transporter family protein; FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, CMP-sialic acid transmembrane transporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: endomembrane system, integral to membrane, Golgi membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189), UDP-galactose transporter (InterPro:IPR004689); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G35335.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16706850..16709909
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123541.5 → NP_568596.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568596.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGE9, Q9FJ38
      UniProtKB/TrEMBL
      A0A178UKB7, A0A5S9YAL2, A0A654G729
      Conserved Domains (1) summary
      pfam04142
      Location:7 → 308
      Nuc_sug_transp; Nucleotide-sugar transporter

    2. NM_001036915.4 → NP_001031992.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031992.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGE9, Q9FJ38
      UniProtKB/TrEMBL
      A0A178UKB7, A0A5S9YAL2, A0A654G729
      Conserved Domains (1) summary
      pfam04142
      Location:7 → 308
      Nuc_sug_transp; Nucleotide-sugar transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LGE9.1

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