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    PTAC7 plastid transcriptionally active7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832500, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PTAC7
    Official Full Name
    plastid transcriptionally active7
    Primary source
    TAIR:AT5G24314
    Locus tag
    AT5G24314
    See related
    Araport:AT5G24314
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PDE225; PIGMENT DEFECTIVE 225; plastid transcriptionally active7; TAC7
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    Genomic context

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    See PTAC7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (8277700..8279400)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ABL interactor-like protein 3 Neighboring gene uncharacterized protein Neighboring gene proline-rich family protein Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene Transducin/WD40 repeat-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PAP8/pTAC6 Is Part of a Nuclear Protein Complex and Displays RNA Recognition Motifs of Viral Origin. Chambon L, et al. Int J Mol Sci, 2022 Mar 11. PMID 35328480, Free PMC Article
    2. Arabidopsis Seedling Lethal 1 Interacting With Plastid-Encoded RNA Polymerase Complex Proteins Is Essential for Chloroplast Development. Jiang D, et al. Front Plant Sci, 2020. PMID 33391315, Free PMC Article
    3. Cytokinin-Regulated Expression of Arabidopsis thaliana PAP Genes and Its Implication for the Expression of Chloroplast-Encoded Genes. Andreeva AA, et al. Biomolecules, 2020 Dec 11. PMID 33322466, Free PMC Article
    4. TAC7, an essential component of the plastid transcriptionally active chromosome complex, interacts with FLN1, TAC10, TAC12 and TAC14 to regulate chloroplast gene expression in Arabidopsis thaliana. Yu QB, et al. Physiol Plant, 2013 Jul. PMID 23082802
    5. pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. Pfalz J, et al. Plant Cell, 2006 Jan. PMID 16326926, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. TAC7 can interact with the four TAC components including FLN1, TAC10, TAC12 and TAC14 which are involved in redox state changes, phosphorylation processes and phytochrome-dependent light signaling. [TAC7]
      Title: TAC7, an essential component of the plastid transcriptionally active chromosome complex, interacts with FLN1, TAC10, TAC12 and TAC14 to regulate chloroplast gene expression in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_147910.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloroplast organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in plastid transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to cytokinin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to light stimulus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in thylakoid membrane organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast nucleoid HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of plastid-encoded plastid RNA polymerase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plastid transcriptionally active7
    NP_001190379.1
    • plastid transcriptionally active7 (PTAC7).
    NP_680215.1
    • plastid transcriptionally active7 (PTAC7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, nucleoid; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8277700..8279400
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203450.1 → NP_001190379.1  plastid transcriptionally active7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190379.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UD19

    2. NM_147910.4 → NP_680215.1  plastid transcriptionally active7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_680215.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4KFT3, Q3YIT6, Q570R0, Q8VZV9
      UniProtKB/TrEMBL
      A0A178UD19, A0A5S9Y6Y1, A0A654G3R2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VZV9.1

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