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    MEB2 Vacuolar iron transporter (VIT) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832496, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MEB2
    Official Full Name
    Vacuolar iron transporter (VIT) family protein
    Primary source
    TAIR:AT5G24290
    Locus tag
    AT5G24290
    See related
    Araport:AT5G24290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MEMBRANE OF ER BODY 2; MOP9.11; MOP9_11
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    Genomic context

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    See MEB2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (8263111..8265748, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene gamma-irradiation and mitomycin c induced 1 Neighboring gene ncRNA Neighboring gene Glycogen/starch synthases, ADP-glucose type Neighboring gene ABL interactor-like protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of two novel endoplasmic reticulum body-specific integral membrane proteins. Yamada K, et al. Plant Physiol, 2013 Jan. PMID 23166355, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MEB1 and MEB2 are endoplasmic reticulum body integral membrane proteins and are probably metal transporters.
      Title: Identification of two novel endoplasmic reticulum body-specific integral membrane proteins.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_122335.4
    NM_180736.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables iron ion transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables manganese ion transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ER body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Vacuolar iron transporter (VIT) family protein
    NP_568441.2
    • Vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: vacuolar iron transporter (VIT) family protein (TAIR:AT4G27860.2); Has 4075 Blast hits to 2852 proteins in 313 species: Archae - 11; Bacteria - 241; Metazoa - 1160; Fungi - 321; Plants - 224; Viruses - 57; Other Eukaryotes - 2061 (source: NCBI BLink).
    NP_851067.1
    • Vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: vacuolar iron transporter (VIT) family protein (TAIR:AT4G27860.1); Has 11871 Blast hits to 4498 proteins in 431 species: Archae - 22; Bacteria - 6501; Metazoa - 1569; Fungi - 486; Plants - 257; Viruses - 63; Other Eukaryotes - 2973 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8263111..8265748 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122335.4 → NP_568441.2  Vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568441.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2F9S4
      Conserved Domains (1) summary
      cl00278
      Location:410 → 500
      CCC1_like; CCC1-related family of proteins

    2. NM_180736.3 → NP_851067.1  Vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851067.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DH25, F4KFS7, Q8LCU6, Q9FNF3
      UniProtKB/TrEMBL
      A0A5S9Y6R9
      Conserved Domains (1) summary
      cl00278
      Location:426 → 516
      CCC1_like; CCC1-related family of proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4KFS7.1

    Gene LinkOut

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