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    SAUR-like auxin-responsive protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831670, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SAUR-like auxin-responsive protein family
    Primary source
    TAIR:AT5G18030
    Locus tag
    AT5G18030
    See related
    Araport:AT5G18030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MCM23.13; MCM23_13; SAUR21; SMALL AUXIN UP RNA 21
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (5968352..5969190)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene ncRNA Neighboring gene NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Neighboring gene target of trans acting-siR480/255 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Constitutive Expression of Arabidopsis SMALL AUXIN UP RNA19 (SAUR19) in Tomato Confers Auxin-Independent Hypocotyl Elongation. Spartz AK, et al. Plant Physiol, 2017 Feb. PMID 27999086, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121808.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SAUR-like auxin-responsive protein family
    NP_197304.1
    • SAUR-like auxin-responsive protein family; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G18020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5968352..5969190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121808.5 → NP_197304.1  SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197304.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FJF9
      UniProtKB/TrEMBL
      A0A178UFM7, A0A5S9Y553, A0A5S9Y5I5
      Conserved Domains (1) summary
      cl23790
      Location:8 → 88
      Auxin_inducible; Auxin responsive protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FJF9.1

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