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    calcium-transporting ATPase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835380, updated on 18-Sep-2024

    Summary

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    Official Full Name
    calcium-transporting ATPase
    Primary source
    TAIR:AT5G53010
    Locus tag
    AT5G53010
    See related
    Araport:AT5G53010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MNB8.7; MNB8_7
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    34
    Sequence:
    Chromosome: 5; NC_003076.8 (21488490..21496537, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ER-based factor for assembly of V-ATPase Neighboring gene SNARE-like superfamily protein Neighboring gene 2A phosphatase associated protein of 46 kD Neighboring gene Ribonuclease P protein subunit P38-like protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001345019.1
    NM_124680.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables P-type calcium transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables P-type calcium transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    calcium-transporting ATPase
    NP_200113.3
    • calcium-transporting ATPase, putative; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21488490..21496537 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124680.3 → NP_200113.3  calcium-transporting ATPase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200113.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654GAF9, F4KHQ2
      Conserved Domains (6) summary
      COG4087
      Location:763 → 826
      COG4087; Soluble P-type ATPase [General function prediction only]
      TIGR01517
      Location:128 → 1035
      ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
      pfam00122
      Location:286 → 504
      E1-E2_ATPase; E1-E2 ATPase
      pfam00689
      Location:875 → 998
      Cation_ATPase_C; Cation transporting ATPase, C-terminus
      pfam00690
      Location:164 → 228
      Cation_ATPase_N; Cation transporter/ATPase, N-terminus
      pfam13246
      Location:549 → 624
      Cation_ATPase; Cation transport ATPase (P-type)

    2. NM_001345019.1 → NP_001331806.1  calcium-transporting ATPase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U7Y1, A0A1P8BEZ2
    Nucleotide Protein
    Heading Accession and Version

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