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    Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833643, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
    Primary source
    TAIR:AT5G36740
    Locus tag
    AT5G36740
    See related
    Araport:AT5G36740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MPK17.2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (14460329..14466043)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ECA1 gametogenesis related family protein Neighboring gene pseudo Neighboring gene Pol-like polyprotein/retrotransposon, putative (DUF239) Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001344144.1
    NM_001344145.1
    NM_001344146.1
    NM_001344147.1
    NM_001344148.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
    NP_001318681.1
    • Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), A.T hook-like (InterPro:IPR020478), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G36670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      14460329..14466043
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344144.1 → NP_001318681.1  Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y9L7, A0A7G2FIL4, F4K4H9
      Conserved Domains (3) summary
      cd04301
      Location:845 → 904
      NAT_SF; N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate
      cd15567
      Location:653 → 692
      PHD4_NSD; PHD finger 4 found in nuclear receptor-binding SET domain-containing (NSD) proteins
      pfam16135
      Location:575 → 626
      Jas; TPL-binding domain in jasmonate signalling

    2. NM_001344145.1 → NP_001330177.1  Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UIG4, A0A1P8BG30, A0A384KZK2
      Conserved Domains (2) summary
      cd15567
      Location:653 → 692
      PHD4_NSD; PHD finger 4 found in nuclear receptor-binding SET domain-containing (NSD) proteins
      pfam16135
      Location:575 → 626
      Jas; TPL-binding domain in jasmonate signalling

    3. NM_001344146.1 → NP_001330178.1  Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UIG4, A0A1P8BG30, A0A384KZK2
      Conserved Domains (2) summary
      cd15567
      Location:653 → 692
      PHD4_NSD; PHD finger 4 found in nuclear receptor-binding SET domain-containing (NSD) proteins
      pfam16135
      Location:575 → 626
      Jas; TPL-binding domain in jasmonate signalling

    4. NM_001344147.1 → NP_001330179.1  Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BA02, Q9LHT5

    5. NM_001344148.1 → NP_001330180.1  Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y9L7, A0A7G2FIL4, F4K4H9
      Conserved Domains (3) summary
      cd04301
      Location:845 → 904
      NAT_SF; N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate
      cd15567
      Location:653 → 692
      PHD4_NSD; PHD finger 4 found in nuclear receptor-binding SET domain-containing (NSD) proteins
      pfam16135
      Location:575 → 626
      Jas; TPL-binding domain in jasmonate signalling
    Nucleotide Protein
    Heading Accession and Version

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