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    PEX19-2 peroxin 19-2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831621, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PEX19-2
    Official Full Name
    peroxin 19-2
    Primary source
    TAIR:AT5G17550
    Locus tag
    AT5G17550
    See related
    Araport:AT5G17550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPEX19-2; K10A8.30; K10A8_30; peroxin 19-2
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    Genomic context

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    See PEX19-2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (5786414..5788304, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phosphoglucosamine mutase family protein Neighboring gene maltose excess-like protein Neighboring gene phosphoglucosamine mutase family protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene BolA-like family protein Neighboring gene TatD related DNase Neighboring gene ncRNA Neighboring gene Phototropic-responsive NPH3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Early-Acting Peroxin PEX19 Is Redundantly Encoded, Farnesylated, and Essential for Viability in Arabidopsis thaliana. McDonnell MM, et al. PLoS One, 2016. PMID 26824478, Free PMC Article
    2. Arabidopsis PEX19 is a dimeric protein that binds the peroxin PEX10. Hadden DA, et al. Mol Membr Biol, 2006 Jul-Aug. PMID 16923726
    3. Pseudo half-molecules of the ABC transporter, COMATOSE, bind Pex19 and target to peroxisomes independently but are both required for activity. Nyathi Y, et al. FEBS Lett, 2012 Jul 30. PMID 22710125
    4. Functional classification of Arabidopsis peroxisome biogenesis factors proposed from analyses of knockdown mutants. Nito K, et al. Plant Cell Physiol, 2007 Jun. PMID 17478547
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001343512.1
    NM_121761.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within peroxisome organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within protein targeting to peroxisome IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in intracellular anatomical structure IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    peroxin 19-2
    NP_568351.1
    • peroxin 19-2 (PEX19-2); CONTAINS InterPro DOMAIN/s: Pex19 protein (InterPro:IPR006708); BEST Arabidopsis thaliana protein match is: peroxin 19-1 (TAIR:AT3G03490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5786414..5788304 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121761.3 → NP_568351.1  peroxin 19-2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568351.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94EI3, Q9LF69
      UniProtKB/TrEMBL
      A0A178UP73, A0A5S9Y5D4, A0A7G2FFA1
      Conserved Domains (1) summary
      pfam04614
      Location:73 → 245
      Pex19; Pex19 protein family

    2. NM_001343512.1 → NP_001332000.1  peroxin 19-2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BFP6
      Conserved Domains (1) summary
      pfam04614
      Location:19 → 191
      Pex19; Pex19 protein family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94EI3.1

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