SVL1 SHV3-like 1 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: SVL1
Official Full Name: SHV3-like 1
Primary source: TAIR:AT5G55480
Locus tag: AT5G55480
See related: Araport:AT5G55480
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: GDPDL4; Glycerophosphodiester phosphodiesterase (GDPD) like 4; glycerophosphodiesterase-like 1; GPDL1; MTE17.19; MTE17_19; SHV3-like 1
Summary: Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.
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Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

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Loss-of-function of GDPD1 leads to inhibition of plant growth during inorganic phosphate starvation.
Title: Characterization of the Arabidopsis glycerophosphodiester phosphodiesterase (GDPD) family reveals a role of the plastid-localized AtGDPD1 in maintaining cellular phosphate homeostasis under phosphate starvation.
SVL1 has an important role in cell wall organization. An shv3-svl1 double mutant has altered crystalline cellulose content with pectin cross-linking modifications. [SVL1]
Title: The glycerophosphoryl diester phosphodiesterase-like proteins SHV3 and its homologs play important roles in cell wall organization.

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

NM_124930.4

Function	Evidence Code	Pubs
enables glycerophosphodiester phosphodiesterase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within guard cell morphogenesis	IGI Inferred from Genetic Interaction more info	PubMed
involved_in lipid metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within plant-type cell wall cellulose metabolic process	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within trichome differentiation	IGI Inferred from Genetic Interaction more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	TAS Traceable Author Statement more info	PubMed
located_in plasma membrane	HDA more info	PubMed
located_in plasma membrane	IDA Inferred from Direct Assay more info	PubMed
located_in plasmodesma	HDA more info	PubMed
located_in plastid	HDA more info	PubMed
located_in secretory vesicle	HDA more info	PubMed

NP_200359.1

SHV3-like 1 (SVL1); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein (TAIR:AT4G26690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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