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    Ubiquitin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830793, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ubiquitin family protein
    Primary source
    TAIR:AT5G09340
    Locus tag
    AT5G09340
    See related
    Araport:AT5G09340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5E8.140; T5E8_140
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (2896675..2896914, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting-associated 9A-like protein Neighboring gene NAC domain containing protein 82 Neighboring gene phosphatidylinositol 4-OH kinase beta2 Neighboring gene tRNA-Leu

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    Ubiquitin family protein
    NP_196496.1
    • Ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 12 (TAIR:AT1G55060.1); Has 8020 Blast hits to 3500 proteins in 614 species: Archae - 0; Bacteria - 2; Metazoa - 3485; Fungi - 998; Plants - 2061; Viruses - 142; Other Eukaryotes - 1332 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2896675..2896914 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120970.1 → NP_196496.1  Ubiquitin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196496.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U7S4, Q9FY81
      Conserved Domains (2) summary
      smart00213
      Location:1 → 72
      UBQ; Ubiquitin homologues
      cl00155
      Location:1 → 79
      UBQ; Ubiquitin-like proteins
    Nucleotide Protein
    Heading Accession and Version

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