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    LMBR1-like membrane protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836654, updated on 18-Sep-2024

    Summary

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    Official Full Name
    LMBR1-like membrane protein
    Primary source
    TAIR:AT5G65290
    Locus tag
    AT5G65290
    See related
    Araport:AT5G65290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MNA5.1; MNA5_1
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (26089436..26094564)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RAB GTPase homolog A4A Neighboring gene ARP2/3 complex 16 kDa subunit (p16-Arc) Neighboring gene GCR2-like 1 Neighboring gene uncharacterized protein Neighboring gene tRNA-Met

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001037073.1
    NM_125927.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LMBR1-like membrane protein
    NP_001032150.1
    • LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 378 Blast hits to 361 proteins in 164 species: Archae - 0; Bacteria - 1; Metazoa - 119; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
    NP_201332.1
    • LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26089436..26094564
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125927.4 → NP_201332.1  LMBR1-like membrane protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201332.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UC82, Q9FKQ8
      Conserved Domains (1) summary
      pfam04791
      Location:3 → 501
      LMBR1; LMBR1-like membrane protein

    2. NM_001037073.1 → NP_001032150.1  LMBR1-like membrane protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032150.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KHW8
      Conserved Domains (1) summary
      pfam04791
      Location:11 → 500
      LMBR1; LMBR1-like membrane protein
    Nucleotide Protein
    Heading Accession and Version

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