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    NUDT10 nudix hydrolase homolog 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828648, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NUDT10
    Official Full Name
    nudix hydrolase homolog 10
    Primary source
    TAIR:AT4G25434
    Locus tag
    AT4G25434
    See related
    Araport:AT4G25434
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATNUDT10; nudix hydrolase homolog 10
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    Genomic context

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    See NUDT10 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (13003568..13005935, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene peptidoglycan-binding LysM domain-containing protein Neighboring gene tRNA-Lys Neighboring gene zinc finger WD40 repeat protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comprehensive analysis of cytosolic Nudix hydrolases in Arabidopsis thaliana. Ogawa T, et al. J Biol Chem, 2005 Jul 1. PMID 15878881
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001036636.2
    NM_001341732.1
    NM_001341733.1
    NM_001341734.1
    NM_001341735.1
    NM_001341736.1
    NM_001341737.1
    NM_001341738.1
    NM_001341739.1
    NM_001341740.1
    NM_001341741.1
    NM_001341742.1
    NM_179112.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ADP-ribose diphosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables NAD binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables NAD+ diphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables NADH pyrophosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nudix hydrolase homolog 10
    NP_001031713.1
    • nudix hydrolase homolog 10 (NUDT10); FUNCTIONS IN: ADP-ribose diphosphatase activity, NAD or NADH binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_849443.2
    • nudix hydrolase homolog 10 (NUDT10); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 1857 Blast hits to 1857 proteins in 579 species: Archae - 36; Bacteria - 1096; Metazoa - 164; Fungi - 9; Plants - 175; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13003568..13005935 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179112.3 → NP_849443.2  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849443.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65616, Q2V3F2, Q6NPD7
      UniProtKB/TrEMBL
      A0A7G2F3N2
      Conserved Domains (1) summary
      cd04670
      Location:111 → 237
      Nudix_Hydrolase_12; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...

    2. NM_001341742.1 → NP_001329747.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V1L0, A0A1P8B8M8

    3. NM_001341732.1 → NP_001329739.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8M5, A0A5S9XW48, A0A654FSR4
      Conserved Domains (2) summary
      cd04670
      Location:111 → 242
      Nudix_Hydrolase_12; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
      pfam18290
      Location:20 → 98
      Nudix_hydro; Nudix hydrolase domain

    4. NM_001341740.1 → NP_001329744.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0V6, A0A1P8B8M9

    5. NM_001341741.1 → NP_001329748.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8N6, A0A5S9XW48

    6. NM_001341739.1 → NP_001329745.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0V6, A0A1P8B8N4

    7. NM_001341738.1 → NP_001329742.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8N9

    8. NM_001341737.1 → NP_001329743.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8N1

    9. NM_001341736.1 → NP_001329746.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8N9

    10. NM_001341734.1 → NP_001329741.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0V6, A0A1P8B8P8

    11. NM_001341733.1 → NP_001329738.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8M4

    12. NM_001036636.2 → NP_001031713.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031713.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2F3N2
      Conserved Domains (1) summary
      cl00447
      Location:111 → 264
      Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...

    13. NM_001341735.1 → NP_001329740.1  nudix hydrolase homolog 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8N5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NPD7.1

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