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    ATPUP13 Drug/metabolite transporter superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826438, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATPUP13
    Official Full Name
    Drug/metabolite transporter superfamily protein
    Primary source
    TAIR:AT4G08700
    Locus tag
    AT4G08700
    See related
    Araport:AT4G08700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T32A17.10; T32A17_10
    Summary
    Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
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    Genomic context

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    See ATPUP13 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (5565773..5567458, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new family of high-affinity transporters for adenine, cytosine, and purine derivatives in Arabidopsis. Gillissen B, et al. Plant Cell, 2000 Feb. PMID 10662864, Free PMC Article
    2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_116940.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables purine nucleobase transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables purine nucleobase transmembrane transporter activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables purine nucleoside transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within purine nucleobase transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Drug/metabolite transporter superfamily protein
    NP_567339.1
    • ATPUP13; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 12 (TAIR:AT5G41160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      5565773..5567458 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116940.2 → NP_567339.1  Drug/metabolite transporter superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567339.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RY83, Q9LDT1
      UniProtKB/TrEMBL
      A0A178UWP4
      Conserved Domains (1) summary
      pfam16913
      Location:36 → 351
      PUNUT; Purine nucleobase transmembrane transport
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RY83.1

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