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    Proline-rich extensin-like family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826393, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Proline-rich extensin-like family protein
    Primary source
    TAIR:AT4G08370
    Locus tag
    AT4G08370
    See related
    Araport:AT4G08370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T28D5.60; T28D5_60
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (5301962..5303314, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene KOW domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Proline-rich extensin-like family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Proline-rich extensin-like family protein
    NP_192577.1
    • Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); Has 67424 Blast hits to 26094 proteins in 1154 species: Archae - 160; Bacteria - 6791; Metazoa - 27948; Fungi - 10095; Plants - 12206; Viruses - 1691; Other Eukaryotes - 8533 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      5301962..5303314 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116906.1 → NP_192577.1  Proline-rich extensin-like family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192577.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9STN1
      Conserved Domains (1) summary
      pfam04554
      Location:88 → 127
      Extensin_2; Extensin-like region
    Nucleotide Protein
    Heading Accession and Version

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