U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RNI-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828184, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    RNI-like superfamily protein
    Primary source
    TAIR:AT4G02760
    Locus tag
    AT4G02760
    See related
    Araport:AT4G02760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5J8.6; T5J8_6
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 4
    Exon count:
    16
    Sequence:
    Chromosome: 4; NC_003075.7 (1223959..1229014, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene F-box SKIP17-like protein Neighboring gene F-box/RNI-like superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene photosystem I subunit D-1 Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001084879.5
    NM_001203733.1
    NM_001340399.1
    NM_001340400.1
    NM_001340401.1
    NM_001340402.1
    NM_001340403.1
    NM_001340404.1
    NM_001340405.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    RNI-like superfamily protein
    NP_001078348.4
    • RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G02740.1); Has 491 Blast hits to 434 proteins in 99 species: Archae - 0; Bacteria - 4; Metazoa - 330; Fungi - 45; Plants - 97; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
    NP_001319852.1
    • RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G02740.1); Has 491 Blast hits to 434 proteins in 99 species: Archae - 0; Bacteria - 4; Metazoa - 330; Fungi - 45; Plants - 97; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
    NP_001319853.1
    • RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G02740.1).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1223959..1229014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084879.5 → NP_001078348.4  RNI-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078348.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SY03
      UniProtKB/TrEMBL
      A0A5S9XPB7, A0A654FLA8
      Conserved Domains (3) summary
      cd09293
      Location:210 → 323
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:222 → 247
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam12937
      Location:117 → 162
      F-box-like; F-box-like

    2. NM_001340403.1 → NP_001329695.1  RNI-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZS0, A0A1P8B8H9
      Conserved Domains (2) summary
      cd09293
      Location:210 → 328
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:222 → 247
      LRR_AMN1; leucine-rich repeat [structural motif]

    3. NM_001340399.1 → NP_001319852.1  RNI-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZS0, A0A1P8B8H9
      Conserved Domains (2) summary
      cd09293
      Location:210 → 328
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:222 → 247
      LRR_AMN1; leucine-rich repeat [structural motif]

    4. NM_001340401.1 → NP_001329696.1  RNI-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZS0, A0A1P8B8H9
      Conserved Domains (2) summary
      cd09293
      Location:210 → 328
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:222 → 247
      LRR_AMN1; leucine-rich repeat [structural motif]

    5. NM_001340400.1 → NP_001319853.1  RNI-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZS0, F4JHU9

    6. NM_001340402.1 → NP_001329697.1  RNI-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZS0, A0A1P8B8H9
      Conserved Domains (2) summary
      cd09293
      Location:210 → 328
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:222 → 247
      LRR_AMN1; leucine-rich repeat [structural motif]

    7. NM_001203733.1 → NP_001190662.1  RNI-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190662.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZS0, F4JHU9
      Conserved Domains (3) summary
      cd09293
      Location:210 → 328
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:222 → 247
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam12937
      Location:117 → 162
      F-box-like; F-box-like

    8. NM_001340404.1 → NP_001329698.1  RNI-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZS0, A0A1P8B8H9
      Conserved Domains (2) summary
      cd09293
      Location:210 → 328
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:222 → 247
      LRR_AMN1; leucine-rich repeat [structural motif]

    9. NM_001340405.1 → NP_001329699.1  RNI-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZS0, A0A1P8B8H9
      Conserved Domains (2) summary
      cd09293
      Location:210 → 328
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:222 → 247
      LRR_AMN1; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SY03.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.