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    Vacuolar iron transporter (VIT) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828900, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Vacuolar iron transporter (VIT) family protein
    Primary source
    TAIR:AT4G27870
    Locus tag
    AT4G27870
    See related
    Araport:AT4G27870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T27E11.110; T27E11_110
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (13878701..13882905)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Glycine-rich protein family Neighboring gene ncRNA Neighboring gene vacuolar iron transporter (VIT) family protein Neighboring gene tRNA-Gln Neighboring gene Protein with RING/U-box and TRAF-like domain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001341890.1
    NM_118925.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    Vacuolar iron transporter (VIT) family protein
    NP_567789.2
    • Vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: vacuolar iron transporter (VIT) family protein (TAIR:AT4G27860.2); Has 285 Blast hits to 248 proteins in 70 species: Archae - 2; Bacteria - 30; Metazoa - 59; Fungi - 10; Plants - 112; Viruses - 4; Other Eukaryotes - 68 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13878701..13882905
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118925.3 → NP_567789.2  Vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567789.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LPT3, Q93ZP6, Q9STN9
      UniProtKB/TrEMBL
      A0A178UYH2, A0A5S9XWW7
      Conserved Domains (1) summary
      cl00278
      Location:641 → 727
      CCC1_like; CCC1-related family of proteins

    2. NM_001341890.1 → NP_001328259.1  Vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B475, A0A654FTG9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LPT3.1

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