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    inositol-1,4,5-trisphosphate 5-phosphatase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828810, updated on 18-Sep-2024

    Summary

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    Official Full Name
    inositol-1,4,5-trisphosphate 5-phosphatase
    Primary source
    TAIR:AT4G27020
    Locus tag
    AT4G27020
    See related
    Araport:AT4G27020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10M23.360; F10M23_360
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (13568367..13571495, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene polyadenylate-binding protein interacting protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ribosome 60S biogenesis amino-terminal protein Neighboring gene fatty acid desaturase A Neighboring gene EAP30/Vps36 family protein Neighboring gene F-box/RNI-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_118836.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    inositol-1,4,5-trisphosphate 5-phosphatase
    NP_194432.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13568367..13571495 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118836.3 → NP_194432.1  inositol-1,4,5-trisphosphate 5-phosphatase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194432.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V3G5, A0A5S9XWB3, Q9SZ41
    Nucleotide Protein
    Heading Accession and Version

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