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    Galactose mutarotase-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821171, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Galactose mutarotase-like superfamily protein
    Primary source
    TAIR:AT3G01260
    Locus tag
    AT3G01260
    See related
    Araport:AT3G01260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T4P13.5; T4P13_5
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (80003..82182, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene splicing regulatory glutamine/lysine-rich-like protein Neighboring gene splicing regulatory glutamine/lysine-rich-like protein Neighboring gene uncharacterized protein Neighboring gene Pectate lyase family protein Neighboring gene voltage dependent anion channel 1 Neighboring gene SPFH/Band 7/PHB domain-containing membrane-associated protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_110992.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Galactose mutarotase-like superfamily protein
    NP_186775.4
    • Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G15140.1); Has 6350 Blast hits to 6088 proteins in 1398 species: Archae - 6; Bacteria - 3037; Metazoa - 664; Fungi - 417; Plants - 287; Viruses - 26; Other Eukaryotes - 1913 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      80003..82182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_110992.5 → NP_186775.4  Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186775.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X855, F4J5Z7
      Conserved Domains (1) summary
      cl14648
      Location:116 → 423
      Aldose_epim; aldose 1-epimerase superfamily
    Nucleotide Protein
    Heading Accession and Version

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