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    SMAD/FHA domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819914, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SMAD/FHA domain-containing protein
    Primary source
    TAIR:AT3G07260
    Locus tag
    AT3G07260
    See related
    Araport:AT3G07260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (2309609..2310983)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RNA-binding (RRM-RBD-RNP motif) domain nuclear transport factor 2 family protein Neighboring gene nuclear transport factor 2/RNA recognition motif protein Neighboring gene GTP cyclohydrolase I Neighboring gene miscRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The forkhead-associated domain 2 (FHA2) in Arabidopsis plays a role in plant fertility by regulating stamen development. Ahn ER, et al. Planta, 2013 Apr. PMID 23192389
    2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_111606.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in regulation of ribosomal protein gene transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SMAD/FHA domain-containing protein
    NP_187382.1
    • SMAD/FHA domain-containing protein; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G07220.1); Has 417 Blast hits to 417 proteins in 140 species: Archae - 0; Bacteria - 2; Metazoa - 118; Fungi - 198; Plants - 82; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2309609..2310983
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111606.2 → NP_187382.1  SMAD/FHA domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187382.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SFV6
      UniProtKB/TrEMBL
      A0A5S9X9Y0, A0A654F4X1
      Conserved Domains (1) summary
      cd00060
      Location:19 → 115
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SFV6.1

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